The first records of two rare polyporoid fungi Picipes submelanopus and Picipes ulleungensis in Russia
UDC 582.284+581.95(571.14+571.150)
Abstract
Molecular genetic studies of the morphological genus Polyporus s. l. recently made it possible to detect the presence of several phylogenetic lineages among its representatives, to clarify the boundaries and scope of the taxon. Species with a black cuticle covering the stipe of the basidiomata have been separated in the genus Picipes. Most representatives of this genus are known from China. In Russia, out of 29 species of the genus, there are three widespread species of Picipes – P. badius, P. melanopus, P. tubaeformis, and one rare species – P. rhizophilus. Phylogenetic analysis of the nucleotide sequences of selected nrDNA loci obtained from the herbarium materials collected by us, originally assigned to Picipes melanopus, revealed the presence of two rare, morphologically similar species, P. submelanopus and P. ulleungensis, which turned out to be new to Russia. Picipes submelanopus is characterized by a terrestrial fruiting bodies and differentiated from P. melanopus, that grows on dead wood. All specimens of fruiting bodies of Picipes submelanopus collected by us in Western Siberia were found on the roots of woody plants, as in the typе locality in China. Picipes ulleungensis differs from P. melanopus by larger fruiting bodies, slightly larger pores. In order to differentiate Picipes submelanopus and P. ulleungensis from morphologically similar species, in addition to morphological characters and ecological preferences, it is desirable to use DNA barcoding methods.
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Bhunjun Ch. S., Niskanen T., Suwannarach N., Wannathes N., Chen Y.-J., McKenzie E. H. C. et al. 2022. The numbers of fungi: are the most speciose genera truly diverse? Fungal Divers. 2022. 114 (1): 387–462. DOI: 10.1007/s13225-022-00501-4
Cui B. K., Li H. J., Ji X., Zhou J. L., Song J., Si J., Yang Z. L., Dai Y. C. 2019. Species diversity, taxonomy and phylogeny of Polyporaceae (Basidiomycota) in China. Fungal Divers. 97: 137–392. DOI: 10.1007/s13225-019-00427-4
Dai Y. C., Xue H. J., Vlasák J., Rajchenberg M., Wang B., Zhou L. W. 2014. Phylogeny and global diversity of Polyporus group Melanopus (Polyporales, Basidiomycota). Fungal Divers. 64: 133–144. DOI: 10.1007/s13225-013-0248-3
Felsenstein J. 2004. Inferring Phylogenies. Massachusetts: Sinauer Associates, Sunderland. 664 pp.
Gardes M., Bruns T. D. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol. Ecol. 2: 113–118. DOI: 10.1111/j.1365-294X.1993.tb00005.x
He X., Zhao C.-L. 2022. Diversity of wood-decaying fungi in Wuliangshan area, Yunnan Province, P. R. China. Diversity 14(2): 131. DOI: 10.3390/d14020131
Ji X., Zhou J. L., Song C. G., Xu T. M., Wu D. M., Cui B. K. 2022. Taxonomy, phylogeny and divergence times of Polyporus (Basidiomycota) and related genera. Mycosphere 13(1): 1–52. DOI: 10.5943/mycosphere/13/1/1
Justo A., Hibbett D. S. 2011. Phylogenetic classification of Trametes (Basidiomycota, Polyporales) based on a five-marker dataset. Taxon 60(6): 1567–1583. DOI: 10.1002/tax.606003
Katoh K., Misawa K., Kuma K., Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nuc. Acid. Res. 30: 3059–3066. DOI: 10.1093/nar/gkf436
Katoh K., Toh H. 2008. Recent developments in the MAFFT multiple sequence alignment program. Brief. Bioinform. 9(4): 286–298. DOI: 10.1093/bib/bbn013
Kumar S., Stecher G., Li M., Knyaz C., Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Mol. Biol.Evol. 35: 1547–1549. DOI: 10.1093/molbev/msy096
Nguyen L.-T., Schmidt H. A., von Haeseler A., Minh B. Q. 2015. IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol. Biol. Evol. 32(1): 268–274. DOI: 10.1093/molbev/msu300
Núñez M., Ryvarden L. 1995. Polyporus (Basidiomycotina) and Related Genera. Oslo: Fungiflora. 85 pp.
Picipes submelanopus (H. J. Xue et L. W. Zhou) J. L. Zhou et B. K. Cui. 2023. In: GBIF Secretariat [2022]. GBIF Backbone Taxonomy. Checklist dataset https://doi.org/10.15468/39omei accessed via GBIF.org on 2023-07-16. URL: https://www.gbif.org/species/9758626
Rambaut A. 2018. FigTree v.1.4.4. In: FigTree – Molecular Evolution, Phylogenetics and Epidemiology. URL: http://tree.bio.ed.ac.uk/software/figtree/ (Accessed 8 December 2022).
Runnel K., Miettinen O., Lõhmus A. 2021. Polypore fungi as a flagship group to indicate changes in biodiversity – a test case from Estonia. IMA Fungus 12: art. 2. DOI: 10.1186/s43008-020-00050-y
Tibpromma S., Hyde K. D., Jeewon R., Maharachchikumbura S. S. N., Liu J.-K., Bhat D. J. et al. 2017. Fungal diversity notes 491–602: taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers. 83: 1–261 DOI: 10.1007/s13225-017-0378-0
Trifinopoulos J., Nguyen L.-T., von Haeseler A., Minh B. Q. 2016. W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis. Nuc. Acid. Res. 44(W1): 232–235. DOI: 10.1093/nar/gkw256
Vu D., Groenewald, M., de Vries M., Gehrmann T., Stielow B., Eberhardt U. et al. 2019. Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Stud.Mycol. 92: 135–154. DOI: 10.1016/j.simyco.2018.05.001
Xue H.-J., Zhou L.-W. 2012. Polyporus submelanopus sp. nov. (Polyporales, Basidiomycota) from Northwest China. Mycotaxon 122: 433–441. DOI: 10.5248/122.433
Zhou J.-L., Zhu L., Chen H., Cui B.-K. 2011. Taxonomic study on a threatened polypore, Polyporus pseudobetulinus, and a morphologically similar species, P. subvarius. Mycoscience 52(5): 319–326. DOI: 10.1007/S10267-011-0111-X
Zhou J.-L., Zhu L., Chen H., Cui B.-K. 2016. Taxonomy and phylogeny of Polyporus group Melanopus (Polyporales, Basidiomycota) from China. PLoS ONE 11(8): e0159495. DOI: 10.1371/journal.pone.0159495
Zmitrovich I. V., Kovalenko A. E. 2016. Lentinoid and polyporoid fungi, two generic conglomerates containing important medicinal mushrooms in molecular perspective. Int. J. Med. Mushr. 18(1): 23–38. DOI: 10.1615/IntJMedMushrooms.v18.i1.40
Змитрович И. В., Малышева В. Ф., Косолапов Д. А., Большаков С. Ю. Эпитипификация и описание Polyporus choseniae (Polyporales, Basidiomycota) // Микол. и фитопатол., 2014. Т. 48, № 4. С. 224–230.
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